2025-04-21T17:16:59 Running all scenarios... 2025-04-21T17:16:59 Setup file saved as harvardblo.cfg in results directory. 2025-04-21T17:16:59 Scenario: 2025-04-21T17:16:59 Camera network proxy for the camera found. Using proxy. 2025-04-21T17:16:59 Analyzing harvardblo Camera images: 2025-04-21T17:16:59 Establishing connection(s)... 2025-04-21T17:16:59 Looking for images... 2025-04-21T17:16:59 Crawling through 34 paths... 2025-04-21T17:17:01 73 possible files found. 2025-04-21T17:17:02 49 possible files found. 2025-04-21T17:17:03 125 possible files found. 2025-04-21T17:17:04 125 possible files found. 2025-04-21T17:17:04 125 possible files found. 2025-04-21T17:17:04 125 possible files found. 2025-04-21T17:17:05 125 possible files found. 2025-04-21T17:17:05 125 possible files found. 2025-04-21T17:17:05 125 possible files found. 2025-04-21T17:17:05 127 possible files found. 2025-04-21T17:17:05 125 possible files found. 2025-04-21T17:17:05 125 possible files found. 2025-04-21T17:17:05 123 possible files found. 2025-04-21T17:17:05 125 possible files found. 2025-04-21T17:17:05 125 possible files found. 2025-04-21T17:17:06 125 possible files found. 2025-04-21T17:17:06 125 possible files found. 2025-04-21T17:17:06 125 possible files found. 2025-04-21T17:17:06 125 possible files found. 2025-04-21T17:17:06 129 possible files found. 2025-04-21T17:17:06 91 possible files found. 2025-04-21T17:17:06 93 possible files found. 2025-04-21T17:17:06 95 possible files found. 2025-04-21T17:17:06 125 possible files found. 2025-04-21T17:17:07 125 possible files found. 2025-04-21T17:17:07 117 possible files found. 2025-04-21T17:17:07 137 possible files found. 2025-04-21T17:17:07 143 possible files found. 2025-04-21T17:17:07 113 possible files found. 2025-04-21T17:17:07 109 possible files found. 2025-04-21T17:17:07 125 possible files found. 2025-04-21T17:17:07 125 possible files found. 2025-04-21T17:17:07 125 possible files found. 2025-04-21T17:17:08 125 possible files found. 2025-04-21T17:17:08 Listing images between dates 2025-03-21 - 2025-04-21 between times of the day 05:15:00 - 18:45:59... 2025-04-21T17:17:08 817 images found. 2025-04-21T17:17:08 Running analysis 1: Plug-in: ml_ann_3_dense_reg_1... 2025-04-21T17:17:08 Reading results of image that are already processed... 2025-04-21T17:17:08 816 images are already processed. 28 images will be processed. Results of 27 images which do not fit the temporal selection will be deleted. 2025-04-21T17:17:08 Checking existing images... 2025-04-21T17:17:08 28 images to be downloaded. 2025-04-21T17:17:08 Downloading/updating images... 2025-04-21T17:18:04 28 images were downloaded. 2025-04-21T17:18:04 Producing polygonic image mask... 2025-04-21T17:18:04 No polygonic masking selected. 2025-04-21T17:18:04 Number of unmasked pixels: 1244160 2025-04-21T17:18:04 Number of images:28 2025-04-21T17:18:04 Testing plugin for batch processing. 2025-04-21T17:18:04 Test list file saved at /FMIprot/srcrun/master_report/src/tmp/bdb29740-e0b0-4b82-a635-41accdd86d96/batch_list.csv 2025-04-21T17:18:04 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running. 2025-04-21T17:18:10 Plugin output: Loading the model 2025-04-21T17:18:10 Plugin output: Reading batch list file 2025-04-21T17:18:10 Plugin output: 1 images to process 2025-04-21T17:18:10 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run. 2025-04-21T17:18:10 Plugin output: Processing images and saving results 2025-04-21T17:18:10 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/bdb29740-e0b0-4b82-a635-41accdd86d96/batch_results.csv 2025-04-21T17:18:11 2025-04-21T17:18:11 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/bdb29740-e0b0-4b82-a635-41accdd86d96/batch_results.csv 2025-04-21T17:18:11 Test successful. Plugin supports batch processing. 2025-04-21T17:18:11 Creating image and mask list to submit to the plugin. 2025-04-21T17:18:11 List file saved at /FMIprot/srcrun/master_report/src/tmp/bdb29740-e0b0-4b82-a635-41accdd86d96/batch_list.csv 2025-04-21T17:18:11 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running. 2025-04-21T17:18:20 Plugin output: Loading the model 2025-04-21T17:18:20 Plugin output: Reading batch list file 2025-04-21T17:18:20 Plugin output: 28 images to process 2025-04-21T17:18:20 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run. 2025-04-21T17:18:20 Plugin output: Processing images and saving results 2025-04-21T17:18:20 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/bdb29740-e0b0-4b82-a635-41accdd86d96/batch_results.csv 2025-04-21T17:18:21 2025-04-21T17:18:21 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/bdb29740-e0b0-4b82-a635-41accdd86d96/batch_results.csv 2025-04-21T17:18:21 Parsing results... 2025-04-21T17:18:21 Merging results... 2025-04-21T17:18:21 Storing results... 2025-04-21T17:18:21 Results are stored in /var/www/html/data/operational/phenocam_ml_p1_nrt/harvardblo/S001A001R000.tsv, /var/www/html/data/operational/phenocam_ml_p1_nrt/harvardblo/S001A001R000.tsvx. 2025-04-21T17:18:21 Results are stored in /var/www/html/data/operational/phenocam_ml_p1_nrt/harvardblo/S001A001R000.csv. 2025-04-21T17:18:21 Running analysis 2: Plug-in: ml_cnn_large_kernel_1... 2025-04-21T17:18:21 Reading results of image that are already processed... 2025-04-21T17:18:21 816 images are already processed. 28 images will be processed. Results of 27 images which do not fit the temporal selection will be deleted. 2025-04-21T17:18:21 Checking existing images... 2025-04-21T17:18:21 0 images to be downloaded. 2025-04-21T17:18:21 Producing polygonic image mask... 2025-04-21T17:18:21 No polygonic masking selected. 2025-04-21T17:18:21 Number of unmasked pixels: 1244160 2025-04-21T17:18:21 Number of images:28 2025-04-21T17:18:21 Testing plugin for batch processing. 2025-04-21T17:18:21 Test list file saved at /FMIprot/srcrun/master_report/src/tmp/a6b6708d-473c-4a64-9b51-7a14caa9d9ca/batch_list.csv 2025-04-21T17:18:21 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running. 2025-04-21T17:18:26 Plugin output: Loading the model 2025-04-21T17:18:26 Plugin output: Reading batch list file 2025-04-21T17:18:26 Plugin output: 1 images to process 2025-04-21T17:18:26 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run. 2025-04-21T17:18:26 Plugin output: Processing images and saving results 2025-04-21T17:18:26 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/a6b6708d-473c-4a64-9b51-7a14caa9d9ca/batch_results.csv 2025-04-21T17:18:27 2025-04-21T17:18:27 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/a6b6708d-473c-4a64-9b51-7a14caa9d9ca/batch_results.csv 2025-04-21T17:18:27 Test successful. Plugin supports batch processing. 2025-04-21T17:18:27 Creating image and mask list to submit to the plugin. 2025-04-21T17:18:27 List file saved at /FMIprot/srcrun/master_report/src/tmp/a6b6708d-473c-4a64-9b51-7a14caa9d9ca/batch_list.csv 2025-04-21T17:18:27 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running. 2025-04-21T17:18:35 Plugin output: Loading the model 2025-04-21T17:18:35 Plugin output: Reading batch list file 2025-04-21T17:18:35 Plugin output: 28 images to process 2025-04-21T17:18:35 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run. 2025-04-21T17:18:35 Plugin output: Processing images and saving results 2025-04-21T17:18:35 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/a6b6708d-473c-4a64-9b51-7a14caa9d9ca/batch_results.csv 2025-04-21T17:18:36 2025-04-21T17:18:36 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/a6b6708d-473c-4a64-9b51-7a14caa9d9ca/batch_results.csv 2025-04-21T17:18:36 Parsing results... 2025-04-21T17:18:36 Merging results... 2025-04-21T17:18:36 Storing results... 2025-04-21T17:18:36 Results are stored in /var/www/html/data/operational/phenocam_ml_p1_nrt/harvardblo/S001A002R000.tsv, /var/www/html/data/operational/phenocam_ml_p1_nrt/harvardblo/S001A002R000.tsvx. 2025-04-21T17:18:36 Results are stored in /var/www/html/data/operational/phenocam_ml_p1_nrt/harvardblo/S001A002R000.csv. 2025-04-21T17:18:36 Scenario: 2025-04-21T17:18:36 Removing (28) downloaded images to save space. 2025-04-21T17:18:36 Camera network proxy for the camera found. Using proxy. 2025-04-21T17:18:36 Checking preview image for harvardblo... 2025-04-21T17:18:36 Updating preview image for camera: PHENOCAM - harvardblo 2025-04-21T17:18:36 Looking for the image for the Time of the image to be used as preview image provided by the setup file.... 2025-04-21T17:18:36 Establishing connection(s)... 2025-04-21T17:18:36 Looking for images... 2025-04-21T17:18:36 112 possible files found. 2025-04-21T17:18:36 Listing maximum 1 images between dates 2020-12-05 - 2020-12-05 between times of the day 12:20:00 - 12:20:59... 2025-04-21T17:18:36 Listing maximum 1 images between dates 2020-12-05 - 2020-12-05 between times of the day 12:20:00 - 12:20:59... 2025-04-21T17:18:36 0 images found. 2025-04-21T17:18:36 Checking existing images... 2025-04-21T17:18:36 0 images to be downloaded. 2025-04-21T17:18:36 Can not find the image for the Time of the image to be used as preview image provided by the setup file. It is removed from the setup. 2025-04-21T17:18:36 Looking for a suitable image... 2025-04-21T17:18:36 20.04.2025 2025-04-21T17:18:36 Establishing connection(s)... 2025-04-21T17:18:36 Looking for images... 2025-04-21T17:18:37 125 possible files found. 2025-04-21T17:18:37 Listing maximum 1 images between dates 2025-04-20 - 2025-04-20 between times of the day 09:00:00 - 18:59:59... 2025-04-21T17:18:37 Listing maximum 1 images between dates 2025-04-20 - 2025-04-20 between times of the day 09:00:00 - 18:59:59... 2025-04-21T17:18:37 1 images found. 2025-04-21T17:18:37 Checking existing images... 2025-04-21T17:18:37 1 images to be downloaded. 2025-04-21T17:18:37 Downloading/updating images... 2025-04-21T17:18:37 Image: 2025-04-21T17:18:37 1 images were downloaded. 2025-04-21T17:18:37 Preview image downloaded/updated for camera: PHENOCAM - harvardblo 2025-04-21T17:18:40 Preparing report... 2025-04-21T17:18:40 Result plots are saved as /var/www/html/data/operational/phenocam_ml_p1_nrt/harvardblo/results.html 2025-04-21T17:18:40 Report is saved as /var/www/html/data/operational/phenocam_ml_p1_nrt/harvardblo/report.html