2025-04-21T16:19:59 Running all scenarios...
2025-04-21T16:19:59 Setup file saved as dukehw.cfg in results directory. 
2025-04-21T16:19:59 Scenario: 
2025-04-21T16:19:59 Camera network proxy for the camera found. Using proxy.
2025-04-21T16:19:59 Analyzing dukehw Camera images:
2025-04-21T16:19:59 Establishing connection(s)...
2025-04-21T16:19:59 Looking for images...
2025-04-21T16:19:59 Crawling through 34 paths...
2025-04-21T16:20:00 73 possible files found.
2025-04-21T16:20:01 49 possible files found.
2025-04-21T16:20:02 125 possible files found.
2025-04-21T16:20:04 125 possible files found.
2025-04-21T16:20:04 125 possible files found.
2025-04-21T16:20:04 47 possible files found.
2025-04-21T16:20:04 47 possible files found.
2025-04-21T16:20:04 125 possible files found.
2025-04-21T16:20:04 47 possible files found.
2025-04-21T16:20:04 125 possible files found.
2025-04-21T16:20:04 123 possible files found.
2025-04-21T16:20:04 125 possible files found.
2025-04-21T16:20:05 47 possible files found.
2025-04-21T16:20:05 47 possible files found.
2025-04-21T16:20:05 125 possible files found.
2025-04-21T16:20:05 125 possible files found.
2025-04-21T16:20:05 125 possible files found.
2025-04-21T16:20:05 123 possible files found.
2025-04-21T16:20:05 47 possible files found.
2025-04-21T16:20:05 123 possible files found.
2025-04-21T16:20:05 125 possible files found.
2025-04-21T16:20:05 123 possible files found.
2025-04-21T16:20:06 47 possible files found.
2025-04-21T16:20:06 123 possible files found.
2025-04-21T16:20:06 47 possible files found.
2025-04-21T16:20:06 125 possible files found.
2025-04-21T16:20:06 125 possible files found.
2025-04-21T16:20:06 123 possible files found.
2025-04-21T16:20:06 125 possible files found.
2025-04-21T16:20:06 123 possible files found.
2025-04-21T16:20:06 125 possible files found.
2025-04-21T16:20:07 125 possible files found.
2025-04-21T16:20:07 125 possible files found.
2025-04-21T16:20:07 125 possible files found.
2025-04-21T16:20:07 Listing images between dates 2025-03-21 - 2025-04-21 between times of the day 05:15:00 - 18:45:59...
2025-04-21T16:20:07 616 images found.
2025-04-21T16:20:07 Running analysis 1: Plug-in: ml_ann_3_dense_reg_1...
2025-04-21T16:20:07 Reading results of image that are already processed...
2025-04-21T16:20:07 616 images are already processed. 27 images will be processed. Results of 27 images which do not fit the temporal selection will be deleted.
2025-04-21T16:20:07 Checking existing images...
2025-04-21T16:20:07 27 images to be downloaded.
2025-04-21T16:20:07 Downloading/updating images...
2025-04-21T16:21:10 27 images were downloaded.
2025-04-21T16:21:10 Producing polygonic image mask...
2025-04-21T16:21:11 No polygonic masking selected.
2025-04-21T16:21:11 Number of unmasked pixels: 1244160
2025-04-21T16:21:11 Number of images:27
2025-04-21T16:21:11 Testing plugin for batch processing.
2025-04-21T16:21:11 Test list file saved at /FMIprot/srcrun/master_report/src/tmp/2754752d-f93c-4be1-828a-384bf40bfeda/batch_list.csv
2025-04-21T16:21:11 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running.
2025-04-21T16:21:17 Plugin output: Loading the model

2025-04-21T16:21:17 Plugin output: Reading batch list file

2025-04-21T16:21:17 Plugin output: 1 images to process

2025-04-21T16:21:17 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run.

2025-04-21T16:21:17 Plugin output: Processing images and saving results

2025-04-21T16:21:17 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/2754752d-f93c-4be1-828a-384bf40bfeda/batch_results.csv

2025-04-21T16:21:17 
2025-04-21T16:21:17 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/2754752d-f93c-4be1-828a-384bf40bfeda/batch_results.csv
2025-04-21T16:21:17 Test successful. Plugin supports batch processing.
2025-04-21T16:21:17 Creating image and mask list to submit to the plugin.
2025-04-21T16:21:17 List file saved at /FMIprot/srcrun/master_report/src/tmp/2754752d-f93c-4be1-828a-384bf40bfeda/batch_list.csv
2025-04-21T16:21:17 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running.
2025-04-21T16:21:28 Plugin output: Loading the model

2025-04-21T16:21:28 Plugin output: Reading batch list file

2025-04-21T16:21:28 Plugin output: 27 images to process

2025-04-21T16:21:28 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run.

2025-04-21T16:21:28 Plugin output: Processing images and saving results

2025-04-21T16:21:28 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/2754752d-f93c-4be1-828a-384bf40bfeda/batch_results.csv

2025-04-21T16:21:29 
2025-04-21T16:21:29 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/2754752d-f93c-4be1-828a-384bf40bfeda/batch_results.csv
2025-04-21T16:21:29 Parsing results...
2025-04-21T16:21:29 Merging results...
2025-04-21T16:21:29 Storing results...
2025-04-21T16:21:29 Results are stored in /var/www/html/data/operational/phenocam_ml_p1_nrt/dukehw/S001A001R000.tsv, /var/www/html/data/operational/phenocam_ml_p1_nrt/dukehw/S001A001R000.tsvx.
2025-04-21T16:21:29 Results are stored in /var/www/html/data/operational/phenocam_ml_p1_nrt/dukehw/S001A001R000.csv.
2025-04-21T16:21:29 Running analysis 2: Plug-in: ml_cnn_large_kernel_1...
2025-04-21T16:21:29 Reading results of image that are already processed...
2025-04-21T16:21:29 616 images are already processed. 27 images will be processed. Results of 27 images which do not fit the temporal selection will be deleted.
2025-04-21T16:21:29 Checking existing images...
2025-04-21T16:21:29 0 images to be downloaded.
2025-04-21T16:21:29 Producing polygonic image mask...
2025-04-21T16:21:29 No polygonic masking selected.
2025-04-21T16:21:29 Number of unmasked pixels: 1244160
2025-04-21T16:21:29 Number of images:27
2025-04-21T16:21:29 Testing plugin for batch processing.
2025-04-21T16:21:29 Test list file saved at /FMIprot/srcrun/master_report/src/tmp/28764cb5-c910-4c81-97d1-d594dc8b9c15/batch_list.csv
2025-04-21T16:21:29 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running.
2025-04-21T16:21:34 Plugin output: Loading the model

2025-04-21T16:21:34 Plugin output: Reading batch list file

2025-04-21T16:21:34 Plugin output: 1 images to process

2025-04-21T16:21:34 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run.

2025-04-21T16:21:34 Plugin output: Processing images and saving results

2025-04-21T16:21:34 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/28764cb5-c910-4c81-97d1-d594dc8b9c15/batch_results.csv

2025-04-21T16:21:35 
2025-04-21T16:21:35 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/28764cb5-c910-4c81-97d1-d594dc8b9c15/batch_results.csv
2025-04-21T16:21:35 Test successful. Plugin supports batch processing.
2025-04-21T16:21:35 Creating image and mask list to submit to the plugin.
2025-04-21T16:21:35 List file saved at /FMIprot/srcrun/master_report/src/tmp/28764cb5-c910-4c81-97d1-d594dc8b9c15/batch_list.csv
2025-04-21T16:21:35 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running.
2025-04-21T16:21:44 Plugin output: Loading the model

2025-04-21T16:21:44 Plugin output: Reading batch list file

2025-04-21T16:21:44 Plugin output: 27 images to process

2025-04-21T16:21:44 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run.

2025-04-21T16:21:44 Plugin output: Processing images and saving results

2025-04-21T16:21:44 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/28764cb5-c910-4c81-97d1-d594dc8b9c15/batch_results.csv

2025-04-21T16:21:44 
2025-04-21T16:21:44 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/28764cb5-c910-4c81-97d1-d594dc8b9c15/batch_results.csv
2025-04-21T16:21:44 Parsing results...
2025-04-21T16:21:44 Merging results...
2025-04-21T16:21:44 Storing results...
2025-04-21T16:21:44 Results are stored in /var/www/html/data/operational/phenocam_ml_p1_nrt/dukehw/S001A002R000.tsv, /var/www/html/data/operational/phenocam_ml_p1_nrt/dukehw/S001A002R000.tsvx.
2025-04-21T16:21:44 Results are stored in /var/www/html/data/operational/phenocam_ml_p1_nrt/dukehw/S001A002R000.csv.
2025-04-21T16:21:44 Scenario: 
2025-04-21T16:21:44 Removing (27) downloaded images to save space.
2025-04-21T16:21:44 Camera network proxy for the camera found. Using proxy.
2025-04-21T16:21:44 Checking preview image for dukehw...
2025-04-21T16:21:44 Updating preview image for camera: PHENOCAM - dukehw
2025-04-21T16:21:44 Looking for the image for the Time of the image to be used as preview image provided by the setup file....
2025-04-21T16:21:44 Establishing connection(s)...
2025-04-21T16:21:44 Looking for images...
2025-04-21T16:21:45 122 possible files found.
2025-04-21T16:21:45 Listing maximum 1 images between dates 2020-12-05 - 2020-12-05 between times of the day 12:20:00 - 12:20:59...
2025-04-21T16:21:45 Listing maximum 1 images between dates 2020-12-05 - 2020-12-05 between times of the day 12:20:00 - 12:20:59...
2025-04-21T16:21:45 0 images found.
2025-04-21T16:21:45 Checking existing images...
2025-04-21T16:21:45 0 images to be downloaded.
2025-04-21T16:21:45 Can not find the image for the Time of the image to be used as preview image provided by the setup file. It is removed from the setup.
2025-04-21T16:21:45 Looking for a suitable image...
2025-04-21T16:21:45 20.04.2025
2025-04-21T16:21:45 Establishing connection(s)...
2025-04-21T16:21:45 Looking for images...
2025-04-21T16:21:46 125 possible files found.
2025-04-21T16:21:46 Listing maximum 1 images between dates 2025-04-20 - 2025-04-20 between times of the day 09:00:00 - 18:59:59...
2025-04-21T16:21:46 Listing maximum 1 images between dates 2025-04-20 - 2025-04-20 between times of the day 09:00:00 - 18:59:59...
2025-04-21T16:21:46 1 images found.
2025-04-21T16:21:46 Checking existing images...
2025-04-21T16:21:46 1 images to be downloaded.
2025-04-21T16:21:46 Downloading/updating images...
2025-04-21T16:21:46 Image: 
2025-04-21T16:21:46 1 images were downloaded.
2025-04-21T16:21:46 Preview image downloaded/updated for camera: PHENOCAM - dukehw
2025-04-21T16:21:49 Preparing report...
2025-04-21T16:21:49 Result plots are saved as /var/www/html/data/operational/phenocam_ml_p1_nrt/dukehw/results.html
2025-04-21T16:21:49 Report is saved as /var/www/html/data/operational/phenocam_ml_p1_nrt/dukehw/report.html