2025-12-15T14:41:49 Running all scenarios...
2025-12-15T14:41:49 Setup file saved as bostoncommon.cfg in results directory. 
2025-12-15T14:41:49 Scenario: 
2025-12-15T14:41:49 Camera network proxy for the camera found. Using proxy.
2025-12-15T14:41:49 Analyzing bostoncommon Camera images:
2025-12-15T14:41:49 Establishing connection(s)...
2025-12-15T14:41:49 Looking for images...
2025-12-15T14:41:49 Crawling through 34 paths...
2025-12-15T14:41:51 76 possible files found.
2025-12-15T14:41:52 49 possible files found.
2025-12-15T14:41:53 123 possible files found.
2025-12-15T14:41:54 123 possible files found.
2025-12-15T14:41:54 123 possible files found.
2025-12-15T14:41:54 121 possible files found.
2025-12-15T14:41:54 125 possible files found.
2025-12-15T14:41:54 121 possible files found.
2025-12-15T14:41:54 123 possible files found.
2025-12-15T14:41:54 119 possible files found.
2025-12-15T14:41:54 125 possible files found.
2025-12-15T14:41:54 123 possible files found.
2025-12-15T14:41:54 119 possible files found.
2025-12-15T14:41:54 123 possible files found.
2025-12-15T14:41:54 123 possible files found.
2025-12-15T14:41:54 123 possible files found.
2025-12-15T14:41:54 122 possible files found.
2025-12-15T14:41:55 124 possible files found.
2025-12-15T14:41:55 124 possible files found.
2025-12-15T14:41:55 122 possible files found.
2025-12-15T14:41:55 124 possible files found.
2025-12-15T14:41:55 120 possible files found.
2025-12-15T14:41:55 122 possible files found.
2025-12-15T14:41:55 122 possible files found.
2025-12-15T14:41:55 126 possible files found.
2025-12-15T14:41:55 126 possible files found.
2025-12-15T14:41:55 124 possible files found.
2025-12-15T14:41:55 120 possible files found.
2025-12-15T14:41:55 120 possible files found.
2025-12-15T14:41:55 124 possible files found.
2025-12-15T14:41:55 124 possible files found.
2025-12-15T14:41:55 126 possible files found.
2025-12-15T14:41:55 124 possible files found.
2025-12-15T14:41:55 122 possible files found.
2025-12-15T14:41:56 Listing images between dates 2025-11-15 - 2025-12-15 between times of the day 05:15:00 - 18:45:59...
2025-12-15T14:41:56 773 images found.
2025-12-15T14:41:56 Running analysis 1: Plug-in: ml_ann_3_dense_reg_1...
2025-12-15T14:41:56 Reading results of image that are already processed...
2025-12-15T14:41:56 774 images are already processed. 25 images will be processed. Results of 26 images which do not fit the temporal selection will be deleted.
2025-12-15T14:41:56 Checking existing images...
2025-12-15T14:41:56 25 images to be downloaded.
2025-12-15T14:41:56 Downloading/updating images...
2025-12-15T14:43:00 25 images were downloaded.
2025-12-15T14:43:00 Producing polygonic image mask...
2025-12-15T14:43:00 No polygonic masking selected.
2025-12-15T14:43:00 Number of unmasked pixels: 1244160
2025-12-15T14:43:00 Number of images:25
2025-12-15T14:43:00 Testing plugin for batch processing.
2025-12-15T14:43:00 Test list file saved at /FMIprot/srcrun/master_report/src/tmp/3b744eb9-6f08-4d45-9fc9-925e78025003/batch_list.csv
2025-12-15T14:43:00 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running.
2025-12-15T14:43:04 Plugin output: Loading the model

2025-12-15T14:43:04 Plugin output: Reading batch list file

2025-12-15T14:43:04 Plugin output: 1 images to process

2025-12-15T14:43:04 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run.

2025-12-15T14:43:04 Plugin output: Processing images and saving results

2025-12-15T14:43:04 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/3b744eb9-6f08-4d45-9fc9-925e78025003/batch_results.csv

2025-12-15T14:43:04 
2025-12-15T14:43:04 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/3b744eb9-6f08-4d45-9fc9-925e78025003/batch_results.csv
2025-12-15T14:43:04 Test successful. Plugin supports batch processing.
2025-12-15T14:43:04 Creating image and mask list to submit to the plugin.
2025-12-15T14:43:04 List file saved at /FMIprot/srcrun/master_report/src/tmp/3b744eb9-6f08-4d45-9fc9-925e78025003/batch_list.csv
2025-12-15T14:43:04 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running.
2025-12-15T14:43:12 Plugin output: Loading the model

2025-12-15T14:43:12 Plugin output: Reading batch list file

2025-12-15T14:43:12 Plugin output: 25 images to process

2025-12-15T14:43:12 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run.

2025-12-15T14:43:12 Plugin output: Processing images and saving results

2025-12-15T14:43:12 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/3b744eb9-6f08-4d45-9fc9-925e78025003/batch_results.csv

2025-12-15T14:43:12 
2025-12-15T14:43:12 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/3b744eb9-6f08-4d45-9fc9-925e78025003/batch_results.csv
2025-12-15T14:43:12 Parsing results...
2025-12-15T14:43:12 Merging results...
2025-12-15T14:43:12 Storing results...
2025-12-15T14:43:12 Results are stored in /var/www/html/data/operational/phenocam_ml_p1_nrt/bostoncommon/S001A001R000.tsv, /var/www/html/data/operational/phenocam_ml_p1_nrt/bostoncommon/S001A001R000.tsvx.
2025-12-15T14:43:12 Results are stored in /var/www/html/data/operational/phenocam_ml_p1_nrt/bostoncommon/S001A001R000.csv.
2025-12-15T14:43:12 Running analysis 2: Plug-in: ml_cnn_large_kernel_1...
2025-12-15T14:43:12 Reading results of image that are already processed...
2025-12-15T14:43:13 774 images are already processed. 25 images will be processed. Results of 26 images which do not fit the temporal selection will be deleted.
2025-12-15T14:43:13 Checking existing images...
2025-12-15T14:43:13 0 images to be downloaded.
2025-12-15T14:43:13 Producing polygonic image mask...
2025-12-15T14:43:13 No polygonic masking selected.
2025-12-15T14:43:13 Number of unmasked pixels: 1244160
2025-12-15T14:43:13 Number of images:25
2025-12-15T14:43:13 Testing plugin for batch processing.
2025-12-15T14:43:13 Test list file saved at /FMIprot/srcrun/master_report/src/tmp/029e52a2-9142-415f-af2c-6a4d4b619709/batch_list.csv
2025-12-15T14:43:13 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running.
2025-12-15T14:43:16 Plugin output: Loading the model

2025-12-15T14:43:16 Plugin output: Reading batch list file

2025-12-15T14:43:16 Plugin output: 1 images to process

2025-12-15T14:43:16 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run.

2025-12-15T14:43:16 Plugin output: Processing images and saving results

2025-12-15T14:43:16 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/029e52a2-9142-415f-af2c-6a4d4b619709/batch_results.csv

2025-12-15T14:43:17 
2025-12-15T14:43:17 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/029e52a2-9142-415f-af2c-6a4d4b619709/batch_results.csv
2025-12-15T14:43:17 Test successful. Plugin supports batch processing.
2025-12-15T14:43:17 Creating image and mask list to submit to the plugin.
2025-12-15T14:43:17 List file saved at /FMIprot/srcrun/master_report/src/tmp/029e52a2-9142-415f-af2c-6a4d4b619709/batch_list.csv
2025-12-15T14:43:17 Submitting image and mask list to the plugin. There may be no logging until the plugin ends running.
2025-12-15T14:43:24 Plugin output: Loading the model

2025-12-15T14:43:24 Plugin output: Reading batch list file

2025-12-15T14:43:24 Plugin output: 25 images to process

2025-12-15T14:43:24 Plugin output: Limiting number of images to 5000 since the plugin crashes. More images will be processed in the next run.

2025-12-15T14:43:24 Plugin output: Processing images and saving results

2025-12-15T14:43:24 Plugin output: Results saved at /FMIprot/srcrun/master_report/src/tmp/029e52a2-9142-415f-af2c-6a4d4b619709/batch_results.csv

2025-12-15T14:43:24 
2025-12-15T14:43:24 Results should be saved at /FMIprot/srcrun/master_report/src/tmp/029e52a2-9142-415f-af2c-6a4d4b619709/batch_results.csv
2025-12-15T14:43:24 Parsing results...
2025-12-15T14:43:24 Merging results...
2025-12-15T14:43:24 Storing results...
2025-12-15T14:43:24 Results are stored in /var/www/html/data/operational/phenocam_ml_p1_nrt/bostoncommon/S001A002R000.tsv, /var/www/html/data/operational/phenocam_ml_p1_nrt/bostoncommon/S001A002R000.tsvx.
2025-12-15T14:43:24 Results are stored in /var/www/html/data/operational/phenocam_ml_p1_nrt/bostoncommon/S001A002R000.csv.
2025-12-15T14:43:24 Scenario: 
2025-12-15T14:43:24 Removing (25) downloaded images to save space.
2025-12-15T14:43:24 Camera network proxy for the camera found. Using proxy.
2025-12-15T14:43:24 Checking preview image for bostoncommon...
2025-12-15T14:43:24 Updating preview image for camera: PHENOCAM - bostoncommon
2025-12-15T14:43:24 Looking for the image for the Time of the image to be used as preview image provided by the setup file....
2025-12-15T14:43:24 Establishing connection(s)...
2025-12-15T14:43:24 Looking for images...
2025-12-15T14:43:24 118 possible files found.
2025-12-15T14:43:24 Listing maximum 1 images between dates 2020-12-05 - 2020-12-05 between times of the day 12:20:00 - 12:20:59...
2025-12-15T14:43:24 Listing maximum 1 images between dates 2020-12-05 - 2020-12-05 between times of the day 12:20:00 - 12:20:59...
2025-12-15T14:43:24 0 images found.
2025-12-15T14:43:24 Checking existing images...
2025-12-15T14:43:24 0 images to be downloaded.
2025-12-15T14:43:24 Can not find the image for the Time of the image to be used as preview image provided by the setup file. It is removed from the setup.
2025-12-15T14:43:24 Looking for a suitable image...
2025-12-15T14:43:24 14.12.2025
2025-12-15T14:43:24 Establishing connection(s)...
2025-12-15T14:43:24 Looking for images...
2025-12-15T14:43:26 123 possible files found.
2025-12-15T14:43:26 Listing maximum 1 images between dates 2025-12-14 - 2025-12-14 between times of the day 09:00:00 - 18:59:59...
2025-12-15T14:43:26 Listing maximum 1 images between dates 2025-12-14 - 2025-12-14 between times of the day 09:00:00 - 18:59:59...
2025-12-15T14:43:26 1 images found.
2025-12-15T14:43:26 Checking existing images...
2025-12-15T14:43:26 1 images to be downloaded.
2025-12-15T14:43:26 Downloading/updating images...
2025-12-15T14:43:26 Image: 
2025-12-15T14:43:26 1 images were downloaded.
2025-12-15T14:43:26 Preview image downloaded/updated for camera: PHENOCAM - bostoncommon
2025-12-15T14:43:29 Preparing report...
2025-12-15T14:43:29 Result plots are saved as /var/www/html/data/operational/phenocam_ml_p1_nrt/bostoncommon/results.html
2025-12-15T14:43:29 Report is saved as /var/www/html/data/operational/phenocam_ml_p1_nrt/bostoncommon/report.html